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staff:mutzel [2018-06-13 09:00]
Petra Mutzel
staff:mutzel [2019-01-11 14:16] (current)
Petra Mutzel [Recent Publications]
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 ===== Research Topics ===== ===== Research Topics =====
  
-  * Algorithm ​engineeringexperimental ​algorithms +  * Algorithm ​Engineeringin particular graph algorithms ​and data structures 
-  * Graph algorithmsdata structures +  * Computational Analytics 
-  * Combinatorial ​optimization +  * Algorithmic Data AnalysisGraph Mining 
-  * Algorithmic data analysis, graph mining +  * Combinatorial ​Optimization (polynomial time and ILP-based) 
-  * Graph drawing, visualization of discrete structures +  * Network Design and Optimization 
-  * Network design ​and optimisation ​ +  * Graph and Network Visualization 
-  * Application areas: network analysis, cheminformatics (drug design), information visualization,​ network design and optimization (e.g. Steiner tree, shortest path), computational biology, physics, ...  +  * Analysis of chemical structures ​and biological networks 
 +  * Application areas: network analysis, cheminformatics (drug design), information visualization,​ network design and optimization (e.g. Steiner tree, shortest path), computational biology, ​statistical ​physics, ... 
 ===== Upcoming Invited Talks ===== ===== Upcoming Invited Talks =====
  
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    * Inventor (in MPG) of the software system AGD: Algorithms for Graph Drawing (distributed by a spin-off of the Max-Planck-Society) and co-developer of the open source software packages OGDF (Open Graph Drawing Framework) and Scaffold Hunter (Chemical Software)    * Inventor (in MPG) of the software system AGD: Algorithms for Graph Drawing (distributed by a spin-off of the Max-Planck-Society) and co-developer of the open source software packages OGDF (Open Graph Drawing Framework) and Scaffold Hunter (Chemical Software)
    * Successfully completed the supervision of 10 Ph.D. students since 2001    * Successfully completed the supervision of 10 Ph.D. students since 2001
-   * Elected member of the Computer Science Faculty (since 2005), the Promotionsausschuss Informatik (since 2006), Fakultätskommission für Haushalt und Struktur (since 2012), the Gleichstellungskommission of the CS Faculty (since 2011), the Senat of the TU Dortmund (2012-2014, deputy ​since 2014) and the SK Fin: Senatskommission für Finanzen of the TU Dortmund (2014-2016).+   * Elected member of the Computer Science Faculty (since 2005), the Promotionsausschuss Informatik (since 2006), Fakultätskommission für Haushalt und Struktur (since 2012), the Gleichstellungskommission of the CS Faculty (since 2011), the Senat of the TU Dortmund (2012-2014, deputy 2014-2018, since July 1, 2018) and the SK Fin: Senatskommission für Finanzen of the TU Dortmund (2014-2016).
  
 ===== Teaching ===== ===== Teaching =====
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 ===== Recent Publications ===== ===== Recent Publications =====
  
-Also see [[http://www.zentralblatt-math.org/​ioport/​en/?q=au:​Mutzel%2C%20P*|io-port.net]] and [[http://​www.informatik.uni-trier.de/​~ley/​db/​indices/​a-tree/​m/​Mutzel:​Petra.html|DBLP]]. My ORCID code is  [[https://​orcid.org/​0000-0001-7621-971X | 0000-0001-7621-971X]].+Also see [[https://scholar.google.de/citations?user=XIaaJv8AAAAJ&​hl=deGoogle Scholar (h-index >= 40)]] and [[http://​www.informatik.uni-trier.de/​~ley/​db/​indices/​a-tree/​m/​Mutzel:​Petra.html|DBLP]] or [[http://​www.zentralblatt-math.org/​ioport/​en/?​q=au:​Mutzel%2C%20P*|io-port.net]]. My ORCID code is  [[https://​orcid.org/​0000-0001-7621-971X | 0000-0001-7621-971X]].
  
-  * **Largest Weight Common Subtree Embeddings with Distance Penalties** (Preprint ​[[https://arxiv.org/abs/1805.00821|arXiv:​1805.00821]]\\ Andre Droschinsky,​ Nils M. Kriege, Petra Mutzel \\ International Symposium ​on Mathematical Foundations of Computer Science ​(MFCS2018, to appear+  * **[[https://​epubs.siam.org/doi/abs/10.1137/​17M1147974?​af=R|Bishellable drawings of Kn]]** \\ //​Bernardo ​M. Abrego, Oswin Aichholzer, Silvia Fernandez-Merchant,​ Dan McQuillan, Bojan Mohar, Petra Mutzel, Pedro Ramos, R. Bruce Richter, and Birgit Vogtenhuber // \\ SIAM Journal ​on Discrete Mathematics,​ vol. 32, no. 4, 482–2492, 2018 (preprint see [[http://​arxiv.org/​abs/​1510.00549 | CoRR abs/​1510.00549]])
  
-  * ** [[https://arxiv.org/abs/1805.06780 The Crossing Number of Single-Pair-Seq-Shellable Drawings of Complete +  * **[[https://​doi.org/10.7155/jgaa.00480A note on block-and-bridge preserving maximum common subgraph algorithms for outerplanar graphs]]** \\ // Nils M. Kriege, Andre Droschinsky, ​Petra Mutzel, ​Journal of Graph Algorithms and Applications//​ \\ vol. 22, no. 4, 607-616, 2018 
-  Graphs ​]]** \\ // Petra Mutzel, Lutz Oettershagen // \\  CoRR abs/1805.06780+ 
 +  * On the Enumeration of Bicriteria Temporal Paths\\ // Lutz Oettershagen ​and Petra Mutzel ​// \\ Theory and Applications of Models of Computation (TAMC 2019), LNCS 11436, Springer, to appear 2019, also see [[https://​arxiv.org/​abs/​1812.02507| CoRR abs/​1812.02507]] 
 + 
 +  * **[[https://​arxiv.org/​abs/​1806.10697|A new Integer Linear Program for the Steiner Tree Problem with Revenues, 
 +  Budget and Hop Constraints]]** ​ \\ // Adalat Jabrayilov and Petra Mutzel // \\ In: Proceedings of Algorithm Engineering & Experiments (ALENEX 2019), SIAM, 2019, to appear (also see CoRR abs/1806.10697)
   ​   ​
-  ​* ** A note on block-and-bridge preserving maximum common subgraph algorithms ​for outerplanar graphs ​** \\ // Nils M. Kriege, Andre Droschinsky, Petra Mutzel, ​2017, [[https://arxiv.org/abs/1805.10754| CoRR abs/1805.10754]], submitted ​// +   * **[[https://​arxiv.org/​abs/​1803.10983|Fixed-Parameter Algorithms ​for the Weighted Max-Cut Problem on Embedded 1-Planar Graphs]]** \\ // Christine Dahn, Nils M. Kriege, Petra Mutzel, ​Julian Schilling // \\ CoRR abs/​1805.06780 (and submitted to Journal) 
 +   
 +  * **[[http://doi.org/10.1007/978-3-030-04414-5\_13|A Flow Formulation for Horizontal Coordinate Assignment with Prescribed Width]]** \\ // Michael JüngerPetra Mutzel and Christine Spisla ​// \\ Graph Drawing and Network Visualization - 26th International Symposium, GD 2018, Lecture Notes in Computer Science 11282, Springer, 187-199, 2018
  
-  * **A Fixed-Parameter Algorithm for the Max-Cut Problem on Embedded 1-Planar Graphs** (Preprint [[https://​arxiv.org/​abs/​1803.10983|arXiv:1803.10983]]) \\ Christine Dahn, Nils M. Kriege, Petra Mutzel \\ International ​Workshop ​on Combinatorial Algorithms ​(IWOCA) 2018, accepted.+  * **[[http://​www.mdpi.com/​2078-2489/​9/​7/​153|More Compact Orthogonal Drawings by Allowing Additional Bends]]** \\ // Michael Jünger, Petra Mutzel and Christine Spisla // \\ Information 2018, 9 (7), art-no. 153, MDPI, doi:​10.3390/​info9010001 
 + 
 +  * **Largest Weight Common Subtree Embeddings with Distance Penalties** (Preprint [[https://​arxiv.org/​abs/​1805.00821|arXiv:1805.00821]]) \\ Andre Droschinsky, Nils M. Kriege, Petra Mutzel \\ 43rd International ​Symposium ​on Mathematical Foundations of Computer Science ​(MFCS) 2018, LIPIcs, vol117, Schloss Dagstuhl - Leibniz-Zentrum fuer Informatik, 54:1-54:15, 2018  
 + 
 +  * ** [[https://​arxiv.org/​abs/​1805.06780 | The Crossing Number of Single-Pair-Seq-Shellable Drawings of Complete Graphs ]]** \\ // Petra Mutzel, Lutz Oettershagen // \\  Proceedings of the 30th Canadian Conference on Computational Geometry (CCCG), 11-17, 2018, also see [[https://​arxiv.org/​abs/​1805.06780| CoRR abs/​1805.06780]] 
 +   
 +  * ** A note on block-and-bridge preserving maximum common subgraph algorithms for outerplanar graphs ** \\ // Nils M. Kriege, Andre Droschinsky,​ Petra Mutzel, 2017, [[https://​arxiv.org/​abs/​1805.10754| CoRR abs/​1805.10754]] // 
  
-  * **Recognizing Cuneiform Signs Using Graph Based Methods** (Preprint [[https://​arxiv.org/​abs/​1802.05908|arXiv:​1802.05908]]) \\ Nils M. Kriege, Matthias Fey, Denis Fisseler, Petra Mutzel, Frank Weichert \\ International Workshop on Cost-Sensitive Learning (COST), SIAM International Conference on Data Mining (SDM) 2018, Proceedings of Machine Learning Research (PMLR), ​to appear+  * **[[http://​proceedings.mlr.press/​v88/​|Recognizing Cuneiform Signs Using Graph Based Methods]]** (Preprint [[https://​arxiv.org/​abs/​1802.05908|arXiv:​1802.05908]]) \\ Nils M. Kriege, Matthias Fey, Denis Fisseler, Petra Mutzel, Frank Weichert \\ International Workshop on Cost-Sensitive Learning (COST), SIAM International Conference on Data Mining (SDM) 2018, Proceedings of Machine Learning Research (PMLR), ​vol. 88, 31-44, 2018
  
   * ** [[https://​onlinelibrary.wiley.com/​doi/​epdf/​10.1002/​cmdc.201700689| CHIPMUNK: A virtual synthesizable small molecule library for medicinal chemistry exploitable for protein-protein interaction modulators]] ** \\ // Lina Humbeck, Sebastian Weigang, Till Schäfer, Petra Mutzel, and Oliver Koch, // \\ ChemMedChem 6/2018, vol- 13, issue 6, Very Important Paper, 532-539, 2018, doi:​10.1002/​cmdc.201700689;​ [[https://​onlinelibrary.wiley.com/​doi/​full/​10.1002/​cmdc.201800126#​ |we also got the cover feature for this article]]   * ** [[https://​onlinelibrary.wiley.com/​doi/​epdf/​10.1002/​cmdc.201700689| CHIPMUNK: A virtual synthesizable small molecule library for medicinal chemistry exploitable for protein-protein interaction modulators]] ** \\ // Lina Humbeck, Sebastian Weigang, Till Schäfer, Petra Mutzel, and Oliver Koch, // \\ ChemMedChem 6/2018, vol- 13, issue 6, Very Important Paper, 532-539, 2018, doi:​10.1002/​cmdc.201700689;​ [[https://​onlinelibrary.wiley.com/​doi/​full/​10.1002/​cmdc.201800126#​ |we also got the cover feature for this article]]
  
-  * ** The Crossing Number of Seq-Shellable Drawings of Complete Graphs ** \\ // Petra Mutzel, Lutz Oettershagen // \\ International Workshop on Combinatorial Algorithms 2018, IWOCA 2018, to appear ​(and [[https://​arxiv.org/​abs/​1803.10983| CoRR abs/​1803.10983]])+  * ** The Crossing Number of Seq-Shellable Drawings of Complete Graphs ** \\ // Petra Mutzel, Lutz Oettershagen // \\ International Workshop on Combinatorial Algorithms 2018, IWOCA 2018, Lecture Notes in Computer Science 10979, 273-284 ​(also see [[https://​arxiv.org/​abs/​1803.10983| CoRR abs/​1803.10983]])
  
-  * ** A Fixed-Parameter Algorithm for the Max-Cut Problem on Embedded 1-Planar Graphs **\\ // Christine Dahn, Nils M. Kriege, Petra Mutzel // \\ International Workshop on Combinatorial Algorithms 2018, IWOCA 2018, to appear ​(and [[https://​arxiv.org/​abs/​1803.07515| CoRR abs/​1803.07515]])+  * ** A Fixed-Parameter Algorithm for the Max-Cut Problem on Embedded 1-Planar Graphs **\\ // Christine Dahn, Nils M. Kriege, Petra Mutzel // \\ 29th International Workshop on Combinatorial Algorithms 2018, IWOCA 2018, Lecture Notes in Computer Science 10979, 141-152 ​(also see [[https://​arxiv.org/​abs/​1803.07515| CoRR abs/​1803.07515]])
  
   * ** [[https://​doi.org/​10.1007/​978-3-319-77404-6_47 |New Integer Linear Programming Models for the Vertex Coloring Problem]]** \\ // Adalat Jabrayilov and Petra Mutzel // \\ 13th Latin American Theoretical INformatics Symposium (LATIN 2018), LNCS 10807, Springer, 640-652, 2018   * ** [[https://​doi.org/​10.1007/​978-3-319-77404-6_47 |New Integer Linear Programming Models for the Vertex Coloring Problem]]** \\ // Adalat Jabrayilov and Petra Mutzel // \\ 13th Latin American Theoretical INformatics Symposium (LATIN 2018), LNCS 10807, Springer, 640-652, 2018
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    * **[[http://​dx.doi.org/​10.1007/​978-3-642-03456-5|The Crossing Number of Graphs: Theory and Computation]]**\\ //Petra Mutzel//\\ in: Albers, S., Alt, H. und Näher, S. (eds.), Efficient Algorithms, Essays dedicated to Kurt Mehlhorn on the occasion of his 60th birthday\\ Lecture Notes in Computer Science 5760, Springer-Verlag,​ 2009, 305-317    * **[[http://​dx.doi.org/​10.1007/​978-3-642-03456-5|The Crossing Number of Graphs: Theory and Computation]]**\\ //Petra Mutzel//\\ in: Albers, S., Alt, H. und Näher, S. (eds.), Efficient Algorithms, Essays dedicated to Kurt Mehlhorn on the occasion of his 60th birthday\\ Lecture Notes in Computer Science 5760, Springer-Verlag,​ 2009, 305-317
- 
 ===== Education and Positions ===== ===== Education and Positions =====
    * since 2004 Full Professor (C4) for Algorithm Engineering / Experimental Algorithms, Computer Science Department, Technische Universität Dortmund    * since 2004 Full Professor (C4) for Algorithm Engineering / Experimental Algorithms, Computer Science Department, Technische Universität Dortmund
 
Last modified: 2018-06-13 09:00 by Petra Mutzel
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