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staff:martin [2013-10-21 16:52]
staff:martin [2015-09-11 10:19] (current)
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 ==== Marcel Martin ==== ==== Marcel Martin ====
  
-| Room: | 209 | 
-| Phone: | +49 231 755-7745 | 
-| Fax: | +49 231 755-7740 | 
 | E-Mail: | marcel //dot// martin //at// tu //dash// dortmund //dot// de | | E-Mail: | marcel //dot// martin //at// tu //dash// dortmund //dot// de |
 | ORCID: | http://​orcid.org/​0000-0002-0680-200X | | ORCID: | http://​orcid.org/​0000-0002-0680-200X |
  
-I am a PhD student at [[http://​www.tu-dortmund.de|TU Dortmund]], [[http://​www.cs.uni-dortmund.de|Department of Computer Science]], [[http://​ls11-www.cs.tu-dortmund.de|Chair of Algorithm Engineering]] within the group //​Bioinformatics for High-Throughput Technologies//​ of [[http://​www.rahmannlab.de/​| Prof. Dr. Sven Rahmann]].+I am a PhD student at [[http://​www.tu-dortmund.de|TU Dortmund]], [[http://​www.cs.tu-dortmund.de|Department of Computer Science]], [[http://​ls11-www.cs.tu-dortmund.de|Chair of Algorithm Engineering]] within the group //​Bioinformatics for High-Throughput Technologies//​ of [[http://​www.rahmannlab.de/​| Prof. Dr. Sven Rahmann]].
  
 ==== Teaching ==== ==== Teaching ====
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   * Winter 2012/13: [[staff:​martin:​algoseq|Algorithmen auf Sequenzen]] (Vorlesung und Übung)   * Winter 2012/13: [[staff:​martin:​algoseq|Algorithmen auf Sequenzen]] (Vorlesung und Übung)
   * Summer 2012: [[http://​www.rahmannlab.de/​lehre/​pg-567-computational-epigenomics|Projektgruppe 567 Computational Epigenomics]]   * Summer 2012: [[http://​www.rahmannlab.de/​lehre/​pg-567-computational-epigenomics|Projektgruppe 567 Computational Epigenomics]]
-  * Winter 2011/12: [[http://​ls1-www.cs.uni-dortmund.de/​cms/​lehre/​blog-2|Einführung in die Informatik für Logistiker und Wirtschaftsingenieure]]+  * Winter 2011/12: [[http://​ls1-www.cs.tu-dortmund.de/​cms/​lehre/​blog-2|Einführung in die Informatik für Logistiker und Wirtschaftsingenieure]]
   * Summer 2010: [[:​teaching:​angebio | Einführung in die angewandte Bioinformatik]]   * Summer 2010: [[:​teaching:​angebio | Einführung in die angewandte Bioinformatik]]
   * Winter 2009/10: [[http://​eini-lw.wikidot.com | Einführung in die Informatik für Logistiker und Wirtschaftsingenieure]]   * Winter 2009/10: [[http://​eini-lw.wikidot.com | Einführung in die Informatik für Logistiker und Wirtschaftsingenieure]]
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 //​Exon-level expression analyses identify MYCN and NTRK1 as major determinants of alternative exon usage and robustly predict primary neuroblastoma outcome//\\ //​Exon-level expression analyses identify MYCN and NTRK1 as major determinants of alternative exon usage and robustly predict primary neuroblastoma outcome//\\
 //British Journal of Cancer//, 2012, 107(8):​1409-1417.\\ //British Journal of Cancer//, 2012, 107(8):​1409-1417.\\
-DOI: [[http://​dx.doi.org/​10.1038/​bjc.2012.391]]+DOI: [[http://​dx.doi.org/​10.1038/​bjc.2012.391|10.1038/​bjc.2012.391]]
  
 Alexander Schramm, Johannes Köster, Tobias Marschall, Marcel Martin, Melanie Schwermer, Kathrin Fielitz, Gabriele Büchel, Matthias Barann, Daniela Esser, Philip Rosenstiel, Sven Rahmann, Angelika Eggert, Johannes H. Schulte\\ Alexander Schramm, Johannes Köster, Tobias Marschall, Marcel Martin, Melanie Schwermer, Kathrin Fielitz, Gabriele Büchel, Matthias Barann, Daniela Esser, Philip Rosenstiel, Sven Rahmann, Angelika Eggert, Johannes H. Schulte\\
 //​Next-generation RNA sequencing reveals differential expression of MYCN target genes and suggests the mTOR pathway as a promising therapy target in MYCN-amplified neuroblastoma//​\\ //​Next-generation RNA sequencing reveals differential expression of MYCN target genes and suggests the mTOR pathway as a promising therapy target in MYCN-amplified neuroblastoma//​\\
 In //​International Journal of Cancer, 2012//\\ In //​International Journal of Cancer, 2012//\\
-DOI: [[http://​dx.doi.org/​10.1002/​ijc.27787]]+DOI: [[http://​dx.doi.org/​10.1002/​ijc.27787|10.1002/​ijc.27787]]
  
 Jing-Woei Li, Keith Robison, Marcel Martin, Andreas Sjödin, Björn Usadel, Matthew Young, Eric C. Olivares, Dan M. Bolser.\\ Jing-Woei Li, Keith Robison, Marcel Martin, Andreas Sjödin, Björn Usadel, Matthew Young, Eric C. Olivares, Dan M. Bolser.\\
 //​SEQanswers wiki: a wiki database of tools for high-throughput sequencing analysis//​\\ //​SEQanswers wiki: a wiki database of tools for high-throughput sequencing analysis//​\\
 Nucleic Acids Research, 2012, 40(D1):​D1313-D1317.\\ Nucleic Acids Research, 2012, 40(D1):​D1313-D1317.\\
-DOI: [[http://​dx.doi.org/​10.1093/​nar/​gkr1058]]+DOI: [[http://​dx.doi.org/​10.1093/​nar/​gkr1058|10.1093/​nar/​gkr1058]]
  
 Marcel Martin.\\ Marcel Martin.\\
 //​[[http://​journal.embnet.org/​index.php/​embnetjournal/​article/​view/​200|Cutadapt removes adapter sequences from high-throughput sequencing reads]]//\\ //​[[http://​journal.embnet.org/​index.php/​embnetjournal/​article/​view/​200|Cutadapt removes adapter sequences from high-throughput sequencing reads]]//\\
-In //​EMBnet.journal//,​ 17, May 2011+In //​EMBnet.journal//,​ 17, May 2011\\ 
 +DOI: [[http://​dx.doi.org/​10.14806/​ej.17.1.200|10.14806/​ej.17.1.200]]
  
 Johannes H. Schulte, Tobias Marschall, Marcel Martin, Philipp Rosenstiel, Pieter Mestdagh, Stefanie Schlierf, Theresa Thor, Jo Vandesompele,​ Angelika Eggert, Stefan Schreiber, Sven Rahmann and Alexander Schramm.\\ Johannes H. Schulte, Tobias Marschall, Marcel Martin, Philipp Rosenstiel, Pieter Mestdagh, Stefanie Schlierf, Theresa Thor, Jo Vandesompele,​ Angelika Eggert, Stefan Schreiber, Sven Rahmann and Alexander Schramm.\\
 
Last modified: 2015-09-08 15:53 (external edit)
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