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===== Teaching (in German) ===== | ===== Teaching (in German) ===== | ||
== Lehrveranstaltung == | == Lehrveranstaltung == | ||
+ | * **Wintersemester 2018/19** | ||
+ | * Übung zu [[http://ls4-www.cs.tu-dortmund.de/cms/de/lehre/2018_ws/rvs/index.html|Rechnernetze und verteilte Systeme]] | ||
* **Sommersemester 2018** | * **Sommersemester 2018** | ||
* [[teaching:dap2_ss18_praktikum|Programmierpraktikum]] zu [[http://ls2-www.cs.tu-dortmund.de/lehre/sommer2018/dap2/|Datenstrukturen, Algorithmen und Programmierung 2]] | * [[teaching:dap2_ss18_praktikum|Programmierpraktikum]] zu [[http://ls2-www.cs.tu-dortmund.de/lehre/sommer2018/dap2/|Datenstrukturen, Algorithmen und Programmierung 2]] | ||
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=== Preprints === | === Preprints === | ||
- | * **[[https://arxiv.org/abs/1805.00821|Largest Weight Common Subtree Embeddings with Distance Penalties]]** \\ Andre Droschinsky, Nils M. Kriege, Petra Mutzel, ''arXiv:1805.00821''. | ||
- | |||
* **[[https://doi.org/10.7287/peerj.preprints.26612v1|Protein Complex Similarity based on Weisfeiler-Lehman labeling]]** \\ Bianca K. Stöcker, Till Schäfer, Petra Mutzel, Johannes Köster, Nils Kriege, Sven Rahmann \\ PeerJ Preprints, vol. 6, e26612v1, 2018. | * **[[https://doi.org/10.7287/peerj.preprints.26612v1|Protein Complex Similarity based on Weisfeiler-Lehman labeling]]** \\ Bianca K. Stöcker, Till Schäfer, Petra Mutzel, Johannes Köster, Nils Kriege, Sven Rahmann \\ PeerJ Preprints, vol. 6, e26612v1, 2018. | ||
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* **[[https://arxiv.org/abs/1612.05531|A general purpose algorithm for counting simple cycles and simple paths of any length]]** \\ Pierre-Louis Giscard, Nils Kriege, Richard C. Wilson, ''arXiv:1612.05531''. | * **[[https://arxiv.org/abs/1612.05531|A general purpose algorithm for counting simple cycles and simple paths of any length]]** \\ Pierre-Louis Giscard, Nils Kriege, Richard C. Wilson, ''arXiv:1612.05531''. | ||
- | === Journal Articles === | + | * **[[https://arxiv.org/abs/1805.10754|A note on block-and-bridge preserving maximum common subgraph algorithms for outerplanar graphs]]** \\ Nils M. Kriege, Andre Droschinsky, Petra Mutzel, ''arXiv:1805.10754''. |
- | * **Erratum to: A polynomial-time maximum common subgraph algorithm for outerplanar graphs and its application to chemoinformatics** \\ Nils M. Kriege, Andre Droschinsky, Petra Mutzel \\ Annals of Mathematics and Artificial Intelligence, 2018, under review. | + | |
+ | |||
+ | === Journal Articles === | ||
* **[[https://doi.org/10.1016/j.ejc.2017.07.012|On Maximum Common Subgraph Problems in Series-Parallel Graphs]]** (Preprint [[http://arxiv.org/abs/1708.02772|arXiv:1708.02772]]) \\ Nils Kriege, Florian Kurpicz, Petra Mutzel \\ European Journal on Combinatorics (EJC), vol. 68, 79-95, 2018. | * **[[https://doi.org/10.1016/j.ejc.2017.07.012|On Maximum Common Subgraph Problems in Series-Parallel Graphs]]** (Preprint [[http://arxiv.org/abs/1708.02772|arXiv:1708.02772]]) \\ Nils Kriege, Florian Kurpicz, Petra Mutzel \\ European Journal on Combinatorics (EJC), vol. 68, 79-95, 2018. | ||
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=== Refereed Conference Proceedings === | === Refereed Conference Proceedings === | ||
- | * **A Property Testing Framework for the Theoretical Expressivity of Graph Kernels** \\ Nils M. Kriege, Christopher Morris, Anja Rey, Christian Sohler \\ International Joint Conference on Artificial Intelligence and European Conference on Artificial Intelligence (IJCAI-ECAI) 2018, accepted. | + | * **Largest Weight Common Subtree Embeddings with Distance Penalties** (Preprint [[https://arxiv.org/abs/1805.00821|arXiv:1805.00821]]) \\ Andre Droschinsky, Nils M. Kriege, Petra Mutzel \\ International Symposium on Mathematical Foundations of Computer Science (MFCS) 2018, accepted. |
- | * **A Fixed-Parameter Algorithm for the Max-Cut Problem on Embedded 1-Planar Graphs** (Preprint [[https://arxiv.org/abs/1803.10983|arXiv:1803.10983]]) \\ Christine Dahn, Nils M. Kriege, Petra Mutzel \\ International Workshop on Combinatorial Algorithms (IWOCA) 2018, accepted. | + | * **[[https://doi.org/10.24963/ijcai.2018/325|A Property Testing Framework for the Theoretical Expressivity of Graph Kernels]]** \\ Nils M. Kriege, Christopher Morris, Anja Rey, Christian Sohler \\ International Joint Conference on Artificial Intelligence and European Conference on Artificial Intelligence (IJCAI-ECAI) 2018, 2348-2354. |
- | * **Recognizing Cuneiform Signs Using Graph Based Methods** (Preprint [[https://arxiv.org/abs/1802.05908|arXiv:1802.05908]]) \\ Nils M. Kriege, Matthias Fey, Denis Fisseler, Petra Mutzel, Frank Weichert \\ International Workshop on Cost-Sensitive Learning (COST), SIAM International Conference on Data Mining (SDM) 2018, accepted. | + | * **[[https://doi.org/10.1007/978-3-319-94667-2_12|A Fixed-Parameter Algorithm for the Max-Cut Problem on Embedded 1-Planar Graphs]]** (Preprint [[https://arxiv.org/abs/1803.10983|arXiv:1803.10983]]) \\ Christine Dahn, Nils M. Kriege, Petra Mutzel \\ International Workshop on Combinatorial Algorithms (IWOCA) 2018, accepted. |
+ | |||
+ | * **[[http://proceedings.mlr.press/v88/kriege18a.html|Recognizing Cuneiform Signs Using Graph Based Methods]]** (Preprint [[https://arxiv.org/abs/1802.05908|arXiv:1802.05908]]) \\ Nils M. Kriege, Matthias Fey, Denis Fisseler, Petra Mutzel, Frank Weichert \\ International Workshop on Cost-Sensitive Learning (COST), SIAM International Conference on Data Mining (SDM) 2018, accepted. | ||
* **[[https://doi.org/10.1007/978-3-319-71273-4_37|Recent Advances in Kernel-Based Graph Classification]]** \\ Nils M. Kriege, Christopher Morris \\ European Conference on Machine Learning and Principles and Practice of Knowledge Discovery in Databases (ECML PKDD) 2017, 388-392. | * **[[https://doi.org/10.1007/978-3-319-71273-4_37|Recent Advances in Kernel-Based Graph Classification]]** \\ Nils M. Kriege, Christopher Morris \\ European Conference on Machine Learning and Principles and Practice of Knowledge Discovery in Databases (ECML PKDD) 2017, 388-392. | ||
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=== Posters === | === Posters === | ||
+ | * **Evaluation and Application of a Graph-based Method for Rational Drug Design** \\ Lina Humbeck, Andre Droschinsky, Till Schäfer, Nils Kriege, Petra Mutzel, Oliver Koch \\ German Conference on Chemoinformatics, 2017. | ||
+ | |||
* **Chemogenomics analysis of small molecule bioactivity data: Privileged scaffolds and conserved structural elements in proteins** \\ Lina Humbeck, Till Schäfer, Nils Kriege, Petra Mutzel, Oliver Koch \\ International Conference on Chemical Structures / German Conference on Chemoinformatics, Noordwijkerhout, The Netherlands, 2014. | * **Chemogenomics analysis of small molecule bioactivity data: Privileged scaffolds and conserved structural elements in proteins** \\ Lina Humbeck, Till Schäfer, Nils Kriege, Petra Mutzel, Oliver Koch \\ International Conference on Chemical Structures / German Conference on Chemoinformatics, Noordwijkerhout, The Netherlands, 2014. | ||