Klausur am 8. Februar 2011

====== Einführung in die angewandte Bioinformatik - Klausur ====== ===== Dateien zum Herunterladen ===== /* * [[/people/martin/bioinfo-2010/unbekannt7.fasta|unbekannt7.fasta]] * [[http://ls11-www.cs.tu-dortmund.de/people/martin/bioinfo-2010/ccd.fasta|ccd.fasta]] * [[http://ls11-www.cs.tu-dortmund.de/people/martin/bioinfo-2010/ccp.fasta|ccp.fasta]] * [[http://ls11-www.cs.tu-dortmund.de/people/martin/bioinfo-2010/gene.txt|gene.txt]] * [[/people/martin/bioinfo-2010/sc1.fasta|sc1.fasta]] * [[/people/martin/bioinfo-2010/sc2.fasta|sc2.fasta]] * [[/people/martin/bioinfo-2010/massen.txt|massen.txt]] */ ===== Links ===== ==== Allgemein ==== * [[http://www.ncbi.nlm.nih.gov/|National Center for Biotechnology Information (NCBI)]] * [[http://www.ebi.ac.uk/|European Bioinformatics Institute]] * [[http://bibiserv.techfak.uni-bielefeld.de/|Bielefeld University Bioinformatics Server]] ==== Literaturdatenbanken ==== * [[http://pubmed.gov| PubMed]] * [[http://www.ncbi.nlm.nih.gov/bookshelf/br.fcgi?book=helppubmed&part=pubmedhelp#pubmedhelp.Search_Field_Descrip|Hilfe zu Search Field Tags]] * [[http://www.ncbi.nlm.nih.gov/sites/entrez?db=mesh| MeSH]] * [[http://www.pubmedcentral.nih.gov/|PubMedCentral]] * [[http://scientific.thomson.com/products/wos|Web of Science]] * [[http://www.isiknowledge.com/|ISI Web of Knowledge]] * [[http://www.ncbi.nlm.nih.gov/Taxonomy/taxonomyhome.html/|NCBI Taxonomy Home Page]] * [[http://journalseek.net/|JournalSeek]] ==== Gen- und Proteindatenbanken ==== * [[http://www.ncbi.nlm.nih.gov/|NCBI]] * [[http://www.ncbi.nlm.nih.gov/|Entrez Cross-database Search]] * [[http://www.uniprot.org/|UniProt Knowledgebase]] * [[http://srs.ebi.ac.uk/|Sequence Retrieval System (SRS)]] * [[http://217.169.56.209/nar/database/c| Datenbankliste bei Nucleic Acids Research (NAR)]] * [[http://www.rcsb.org/pdb/home/home.do| RCSB Protein Data Bank (PDB)]] * [[http://www.bioinf.manchester.ac.uk/dbbrowser/PRINTS| PRINTS Database]] * [[http://www.cathdb.info/| CATH Protein Structure Classification]] * [[http://www.wwpdb.org/| World Wide Protein Databank]] * [[http://genome.ucsc.edu/| The UCSC Genome Browser]] * [[http://pfam.sanger.ac.uk/|Pfam Protein Domains]] * [[http://www.brenda-enzymes.info/|BRENDA]] ==== Werkzeuge ==== * [[http://expasy.org/| ExPASy Proteomics Server]] ([[http://expasy.org/tools/peptidecutter/|PeptideCutter]], [[http://expasy.org/tools/protparam.html|ProtParam]]) * [[http://www.ncbi.nlm.nih.gov/BLAST| NCBI BLAST]] * [[http://www.ebi.ac.uk/clustalw| CLUSTAL]] * [[http://rna.tbi.univie.ac.at/cgi-bin/RNAfold.cgi| RNAfold]] * [[http://myhits.isb-sib.ch/cgi-bin/dotlet| Dotlet]] * [[http://www.ebi.ac.uk/emboss/|EMBOSS Tools]] ==== Phylogenetik ==== * [[http://evolution.genetics.washington.edu/phylip/software.html| Phylogeny Programs Overview]] * [[http://www.tolweb.org/tree/|Tree of Life]] * [[http://bioinfo.hku.hk/phylipinterface.html| Phylip]] * [[http://mobyle.pasteur.fr/|Mobyle-Portal]] ==== Genexpression ==== * [[http://www.ncbi.nlm.nih.gov/geo/|Gene Expression Omnibus (GEO)]] ==== Biologische Netzwerke und Pathwayanalyse ==== * [[http://www.genome.ad.jp/kegg/pathway.html| KEGG Pathway]]