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~~NOCACHE~~ | ~~NOCACHE~~ | ||
- | Our chair for Algorithm Engineering - LS11 - has been founded in 1985. [[http://ls11-www.cs.tu-dortmund.de/staff/schwefel|Professor Hans-Paul Schwefel]], the predecessor of [[staff:mutzel|Professor Petra Mutzel]], was the head of the chair (called Systemanalyse) until his retirement in 2006. Currently, the chair consists of four research groups: | + | Currently, the chair for Algorithm Engineering consists of four research groups: |
{{ :mutzel:ae-cycle.png?200|Algorithm Engineering cycle}} | {{ :mutzel:ae-cycle.png?200|Algorithm Engineering cycle}} | ||
{{ :mutzel:chemmedchem-coverfeaturechipmunksbildneu2018-journal.jpg?direct&160|COVER FEATURE FOR OUR WORK ON VIRTUAL MOLECULE LIBRARY}} | {{ :mutzel:chemmedchem-coverfeaturechipmunksbildneu2018-journal.jpg?direct&160|COVER FEATURE FOR OUR WORK ON VIRTUAL MOLECULE LIBRARY}} | ||
<html><br /></html> | <html><br /></html> | ||
- | **[[mutzel:start|Prof. Dr. Petra Mutzel: Algorithm Engineering (Chair)]]** | + | **[[mutzel:start|Prof. Dr. Petra Mutzel: Algorithm Engineering (Chair):]]**<html><br /></html> |
+ | <color #ed1c24> ** now at University of Bonn: ** [[https://ca.cs.uni-bonn.de|Computational Analytics at Bonn University]]</color> | ||
* Algorithm Engineering, in particular graph algorithms and data structures | * Algorithm Engineering, in particular graph algorithms and data structures | ||
* Computational Analytics | * Computational Analytics | ||
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* Graph and Network Visualization | * Graph and Network Visualization | ||
* Analysis of chemical structures and biological networks | * Analysis of chemical structures and biological networks | ||
- | + | \\ | |
- | <html><br style="clear:right;" /></html> | + | |
**[[:fischer:start|Prof. Dr. Johannes Fischer: Algorithmic Foundations and Education in Computer Science]]** | **[[:fischer:start|Prof. Dr. Johannes Fischer: Algorithmic Foundations and Education in Computer Science]]** | ||
- | * Text Indexing | + | * algorithm engineering |
- | * Succinct Data Structures | + | * text indexing |
- | * (lower) secondary computer science education | + | * succinct data structures |
- | * Algorithms for Big Data | + | * (lower) secondary computer science education |
+ | * algorithms for Big Data | ||
+ | * parallel algorithms | ||
\\ | \\ | ||
- | **[[http://www.rahmannlab.de/|Prof. Dr. Sven Rahmann: Bioinformatics for High-Throughput Technologies]]**\\ | + | **[[http://www.rahmannlab.de/|Prof. Dr. Sven Rahmann: Bioinformatics]]**\\ |
//Sven Rahmann is now chair of Genome Informatics at the University of Duisburg-Essen. | //Sven Rahmann is now chair of Genome Informatics at the University of Duisburg-Essen. | ||
- | The group continues its research and teaching courses at LS XI.// | + | The group continues teaching courses and several research projects at TU Dortmund, supported by a University Alliance Ruhr professorship, supported by Mercator Research Center Ruhr (MERCUR).// |
* Efficient algorithms for large biological datasets in genomics, transcriptomics, proteomics, and metabolomics | * Efficient algorithms for large biological datasets in genomics, transcriptomics, proteomics, and metabolomics | ||
- | * Analysis of high-throughput sequencing data (e.g., SOLiD, Illumina, 454) | + | * Analysis of high-throughput sequencing data (e.g., Illumina, Nanopore, etc.) |
- | * Analysis of spectrometry data (IMS, MS, NMR) with a focus on metabolomics | + | * Engineering of hashing algorithms, e.g. multi-way Cuckoo hashing |
* Reconstruction and analysis of complex biological networks, especially protein hypernetworks (protein networks with additional constraints) | * Reconstruction and analysis of complex biological networks, especially protein hypernetworks (protein networks with additional constraints) | ||
* Algorithmic statistics in bioinformatics and applications of combinatorial optimization in bioinformatics | * Algorithmic statistics in bioinformatics and applications of combinatorial optimization in bioinformatics | ||
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<html><br style="clear:right;" /></html> | <html><br style="clear:right;" /></html> | ||
- | + | ||
+ | The chair for Algorithm Engineering was founded in 1985. [[http://ls11-www.cs.tu-dortmund.de/staff/schwefel|Professor Hans-Paul Schwefel]], the predecessor of [[staff:mutzel|Professor Petra Mutzel]], was the head of the chair (called Systemanalyse) until his retirement in 2006. | ||